Category Archives: Hardbunnsfauna

Fieldwork for two projects

The projects HypCop (bottom-associated copepods) and Hardbunnsfauna (Invertebrate fauna of marine rocky shallow-water habitats) went on a day-trip to three localities last week.

We made the most of the sunny and calm weather to visit a very exposed site on Sotra, where we collected in the tide pools and on the barnacle-encrusted intertidal.

Afterwards, we went to two marinas, Glesvær and Hjellestad, on a quest for some specific species the projects were in need of.

Back in the lab we set to work documenting the colours of the animals by photographing them alive, as the colours tend to face in fixatives.

It was nice day in the field, and it looks like we found the species we were after!

Follow us on Twitter and Instagram as @PlanetCopepod and @Hardbunnsfauna

– Jon, Cessa & Katrine

 

Bryozoa-workshop at Espegrend

February 14th -18th 2022

The Bryozoa are maybe not the most famous of animals, so let’s start with a quick rundown: Bryozoa, also known as Polyzoa, Ectoprocta, or moss animals (mosdyr, på norsk) are a phylum of aquatic invertebrates. Bryozoans, together with phoronids and brachiopods, have a special feeding structure called a lophophore, a “crown” of hollow tentacles used for filter feeding, which you can see in action in the video Tine captured:

In Norway we have 292 species registered, of which 281 are marine (Kunnskapsstatus for artsmangfoldet 2020, pdf here). It is estimated that the actual number of species present is higher. Further, several known species are considered “door knocker species” that may establish here within the next 50 years.

Bryozoa mostly live in colonies made up of tiny individual animals called zooids, which grow in a variety of shapes, and some of them provide structural habitats for other species. They are food for many other animals, namely nudibranchs, fish, sea urchins, pycnogonids, crustaceans, mites and starfish. Marine bryozoans are often responsible for biofouling on ships’ hulls, on docks and marinas, and on offshore structures. They are among the first colonizers of new or recently cleaned structures, and may hitchhike to new places with marine traffic. (Bonus: they have a super interesting fossil record, and this can be used to tell us more about the world in the way back!)

A few of the shapes the colonies can grow in. Pictured are 1: Membraniporella nitida 2: Bugula sp. 3: Flustrella hispida 4: Crisia eburnea

They are one of the focus groups of Hardbunnsfauna: there is still a lot we do not know about them!

Ernst Haeckel – Kunstformen der Natur (1904), plate 23: Bryozoa. Public domain, accessed through Wikipedia

Planning in a pandemic is not easy, and we have had to postpone our plans for this gathering several times. The second week of February we could finally gather our “Team Bryozoa” here in Bergen for a week of in-depth studies of these fascinating animals.

Team Bryozoa (centre), from left Piotr, Mali, Jo and Lee Hsiang, and some of the animals they studied. Group photo by Piotr Kuklinski

In total we were 11 participants;
University Museum of Bergen: Endre, Jon, Tom and Katrine,
Natural History Museum in Oslo: Lee Hsiang and Mali,
NTNU University Museum: Torkild, Tine (MSc. student) and Tiril (MSc. student),
and our two visitors from abroad:
from the Institute of Oceanology, Polish Academy of Sciences came Piotr,
and from the Heriot Watt University (Orkney Campus), Joanne.

The main focus of the workshop was to get as many samples and species as possible identified, work though the DNA barcode vouchers from samples submitted in advance and reach a consensus on which species the dubious ones were, to network with our colleagues, and to include the students in the work and the team. It all went swimmingly, and a we had a very productive and enjoyable week!

check out @hardbunnsfauna on Instagram for more!

 

We set up camp on Espegrend Marine Biological station, and combined long days in the lab studying material collected throughout the project with shorter trips out on R/V Hans Brattstrøm.

Here we collected live colonies, introduced the students to various collecting methods, and let everyone catch some fresh fjord air.

 

Tine (top left) working together with Mali in the lab and in the field.

 

 

Tine is doing her master thesis on the species distribution of Bryozoa in shallow water along the Norwegian coast.

During the workshop she got the chance to have some of the difficult species identifications verified by the experts,  and she prepared a plate of 95 tissue samples that will be DNA barcoded though NorBOL.

 

 

Tiril, top left, together with Jon on the ship and working in the lab.

 

We also had Tiril with us, who is just starting out on what will become a thesis on ascidians (sea squirts), most likely with a focus on species in the genus Botryllus and Botrylloides. 

She worked together with Tom, getting familiar with the literature and the methods used for working on the group. Like Tine, she will be using a combination of traditional morphology based methods and genetic data.

 

A few impressions from the week

Going forward we’ll first send the plate of tissue samples to CCDB to be sequenced, fingers crossed for good results! During the week, *so many* samples were identified, so we will certainly be preparing more plates during the spring. All the identified samples will be included into the scientific collections of the museum.

Thank you so much to all the participants for their efforts!

-Katrine

2021 in review for Hardbunnsfauna

Another year of our “Hardbunnsfauna”-project;  Invertebrate fauna of marine rocky shallow-water habitats: species mapping and DNA barcoding (funded by the Norwegian taxonomy Initiative) is coming to an end.

I opted for an easy way to show some of the activities we’ve had on our by selecting a post from each month on our Instagram account to share.

Do give us a follow, if you aren’t already: we are @hardbunnsfauna on both Instagram and Twitter!

Click on the images to expand them

January: Field work on R/V Hans Brattstrøm in gorgeous (but FREEZING) weather

February: our report from field work in Saltstraumen got published

March: Workshop at Espegrend field station together with the projects HypCop and NorChitons

April: results are coming in on some of the DNA barcoding we are doing. Sponges (like the blue one here) are tricky to barcode, but we are getting some interesting results!

May: we have also barcoded a lot of other groups, including a substantial amount of microgastropods (tiny snails)

June: The first master student from the project successfully presented his thesis

July: We played marine invertebrate bingo (did you get a full set..?)

August: Fieldwork in the neighborhood; we sampled invertebrates from the fjord clean-up SUB was doing in Puddefjorden

September: We participated at an event at Os together with Havkollektivet, introducing the invertebrate and vertebrate locals to each other

October: Katrine was on a research cruise with limited internet, but did sample many interesting critters for the project

November: Field work in Haugesund, where Slettaa Dykkerklubb arranged a course on marine biology for divers

December: Pre-end-of-year-hectic-season, but we are enjoying the contributions coming in (physical and electronic) from our wonderful citizen scientists!

Then we wish you all some very
-Katrine

Sampling together in the Sognefjord

From 09 to 13th of May different artsdatabanken projects within the Natural history museum joined efforts during a fieldwork trip to Hjartholm located at the Sognefjord.

The Sognefjord is an interesting fjord for sampling as it is the largest and deepest fjord in Norway and the second largest in the world! This often results in some unique fauna, especially at greater depths. Therefore HYPCOP (Hyper benthic copepods), NORHYDRO (Norwegian Hydrozoa), AnDeepNor (Annelids from the Deep Norwegian Waters) and Hardbunnsfauna (rocky shore invertebrates) travelled toward the small town Hjartholm were we set up laboratory and living space for sampling and processing fresh material.

Hjartholm is located towards the exit of the Sognefjord. From here we would do shallow and deep sampling with help of Research Vessel Hans Brattstrøm

Team members from different projects, Norhydro, HYPCOP, hardbunnsfauna and AndeepNor in front of the boathouse that was transformed into a lab for the occasion

Boathouse communal area turned into a temporary lab

AnDeepNor was on the quest of collecting marine bristle worms (annelida) from the deepest part of the Sognefjord, about 1000m deep.

AnDeepNor researchers from ltr; Miguel Angel Mecca, Tom Alvestad, Nataliya Budaeva, Jon Kongsrud

Jon Kongsrud with the grab

This would be done with the help of research vessel Hans Brattstrøm and a so-called grab. A grab is a device that looks like a clamshell made out of heavy metal. It would be dropped in the water open, and once touching the bottom it would close and grab soft bottom sample.

Unfortunately, on the first day some important machinery for collecting deep samples broke after the third grab. And therefore, AnDeepNor was stuck with only 3 samples for the remaining of the fieldwork days. The good news however is that they did find a great diversity of worms in the only 3 grab samples they found.

 

Project leader Nataliya with in her hand a plate with clipped tissues from her worms

Once the worms were sorted, preliminary identified and catalogued small tissue was clipped of 96 specimens for barcoding at the University of Bergen DNA laboratory.

All the results of this will be publicly available at the end of the AnDeepNor project in October this year. We are looking forward to their results!

 

 

 

 

NorHydro has been working hard on collecting hydrozoan samples from different localities in Norway.

NorHydro researchers from ltr Luis Martell and Joan Soto Angel

This time they were more than happy to join the possibility of getting some seriously deep samples from the Sognefjord. With their plankton net they went sampling up to 1200m, which resulted in some beautiful specimens

Left: Margelopsis hartlaubii, right: juvenile Melicertum octocostatum

They also took the opportunity to collect some shallow-water benthic hydroids, just in front of the lab where there was a small dock for boats. In the lab they set up a photo-studio to make some beautiful macro images of their collected specimens for everyone to enjoy.

Left: Laomedea flexuosa; top right: Bougainvillia muscus; bottom right: Eudendrium sp.

HYPCOP (Picture 9. Team HYPCOP with ltr Francisca Carvahlo, Cessa Rauch and Jon Kongsrud) focus this time was mainly shallow water around the Sognefjord by snorkelling (picture 10. Sampling for Hardbunnsfauna and HYPCOP by means of snorkelling), we sampled from 4 different stations and as you can guess, there were copepods in all of them.

Team HYPCOP with ltr Francisca Carvahlo, Cessa Rauch and Jon Kongsrud

Sampling for Hardbunnsfauna and HYPCOP by means of snorkelling

However, some locations had definitively more diversity than others, this mostly had to do with the site being more exposed, or whether there was a lot of freshwater run-off from land that would influence the sites salinity. The fresh collected copepods were photographed and are now ready to be prepared for barcoding in order to determine the species. And although small, they can be very beautiful as well, just not always easy to photograph such active critters.

Even though we had to deal with some gear equipment failure, we still managed to have a very productive week of sampling, in which all the participating projects got their hands-on valuable specimens from the amazing Sognefjord!

Interested to follow up with these projects? You can find us across all social media platforms (Twitter, Instagram and Facebook @hardbunnsfauna, @planetcopepod #NorHydro #AnDeepNor), see you there!

-Cessa, Nataliya & Joan

Copepod girls!

Copepod girls; Cessa Rauch (left) and Francisca Carvalho (right) working on copepods, photo Katrine Kongshavn).

International Woman’s Day was on 8th of March and this coincided this year with the start of a great fieldwork trip with an (almost) girl only expedition team!

Multiple research projects headed towards Espegrend Marine Biological field station in Bergen, to spend the week collecting and sorting specimens. The group consisted of representatives of Hardbunnsfauna (rocky shore invertebrates @hardbunnsfauna), Norchitons (Norwegian chitons @norchitons) and HYPCOP (copepods @planetcopepod).

From ltr; HYPCOP (Cessa Rauch), Norchitons (Nina Mikkelsen), HYPCOP (Francisca Carvalho), Hardbunnsfauna (Katrine Kongshavn). Photo: Jon Kongsrud

The plan for the week was to have access to the research vessel Hans Brattström while also working from the field station on the mainland. This would give us very good opportunities for reaching different sampling habitats. But as always with fieldwork expect the unexpected; unfortunately, after day 1, our R/V Hans Brattström got motor problems, so the planned dredge sampling did not happen. It is good to be creative in those situations because we still managed to get a lot of sampling done by collecting at the piers where the research vessel was docked and in front of the research station itself.

View from the research station in Espegrend, photo Cessa Rauch.

Sampling from the pier in front of the research station, photo Francisca Carvalho

On one of the days (when the sun was out!) we took the small research boat from the field station to explore the habitats of the nearby islands and do some shallow sampling there.

Out sampling with the small boat, photo Cessa Rauch

Once we arrived at the island of Søre Egdholmen we needed to dock the small boat without a pier; rest assure this gave interesting scenarios with being half in the water while the rest of the team and the equipment was in the boat.

Docking the small boat without a pier, photo by F. Carvalho

Once on the island we started to collect lots of material; for copepods, especially shallow benthic ones, that is quite a simple task. The best way is to use a fine meshed net, like a plankton net, and grab a lot of substrate like algae, some sand and small gravel. A lot of species basically stick to the substrate and with the plankton net have no way to escape. By keeping the plankton net with substrate in a bucket with seawater the samples stay fresh the longest.  Back to the marine biological station we kept the freshly collected samples in tanks with good saltwater circulation (which the station has access to in the laboratories).

Well let me tell you, we had such nice samples off copepods, not only just the quantity (because with copepods that is never a real issue), but very diverse too.

A drop of copepods, rich diversity from Espegrend. Photo: Cessa Rauch

Every single morphotype was being documented while they were still alive to keep the colors intact.

Overview of the different morphotypes we collected

And then numbered, labeled and fixated in ethanol for the collection.

Copepod collection

The goal for HYPCOP this week was to collect and register fresh copepod samples for DNA barcoding.

Back in Bergen we brought our copepods to the laboratory for DNA barcoding.

Their DNA is, as we speak, on their way to the sequencing center in Canada to become part of the Barcode of Life Data System that eventually everyone will have access to. Curious to see what this platform is all about, check out http://www.barcodinglife.org.

Until next time! Don’t forget to follow @planetcopepod on Twitter https://twitter.com/planetcopepod and Instagram https://www.instagram.com/planetcopepod/ or become a member of or Facebook group, see you there! https://www.facebook.com/groups/planetcopepod

-Cessa & Francisca

 

 

 

Fieldwork at Sletvik Fieldstation!

From Monday 12th of October till Monday the 19th a bunch of different projects funded by the Norwegian taxonomy initiative travelled up North together to meet up with researchers from NTNU in the NTNU Sletvik field station.

Front of Sletvik fieldstation main building, photo credits Nina T. Mikkelsen

Sletvik fieldstation is NTNU owned and is a short drive from Trondheim. The Germans built the station during the Second World War. Ever since it has been used as a town hall, a school and a shop. In 1976 the NTNU University took over the building and transformed it into a field station, which it remains ever since. The entire station contains of two buildings that has room for a total of 75 people (Before Corona). The main building has a kitchen, dining and living room plus a large teaching laboratory, a multilab and two seawater laboratories. Besides it has bedrooms, sauna, laundry rooms, and showers, fully equipped! The barracks have additional bedrooms and showers, all in all, plenty of space.

 

From the Natural History Museum of Bergen, 5 current running projects would use the NTNU fieldstation facilities for a week in order to work on both fixed as well as fresh material. Besides HYPCOP (follow @planetcopepod), we had Hardbunnsfauna (Norwegian rocky shore invertebrates @hardbunnsfauna), Norhydro (Norwegian Hydrozoa), Norchitons (Norwegian chitons @norchitons) and NorAmph2 (Norwegian amphipods) joining the fieldwork up North!

Lot of material needed to be sorted, photo credit @hardbunnsfauna / Katrine Kongshavn

 

At the Sletvik fieldstation, a lot of material from previous fieldwork was waiting for us to be sorted.

For HYPCOP we wanted to focus mostly on fresh material, as this was a new location for the project. And not just new, it was also interesting as we have never been able to sample this far north before.  Almost every day we tried to sample fresh material from different locations around the fieldstation

Cessa and Francisca on the hunt for copepods, photo credits Katrine Kongshavn)

On top of that we aimed to sample from different habitats. From very shallow heavy current tidal flows, rocky shores, steep walls, almost closed marine lakes (pollen called in Norwegian) and last but not least, sea grass meadows

Different habitats give different flora and invertebrate fauna, photo credits Nina T. Mikkelsen

Sampling we did by either dragging a small plankton net trough the benthic fauna or the most efficient way, going snorkeling with a net bag

Ready for some snorkeling with Cessa and August, photo credits Torkild Bakken

Benthic copepod species tend to cling on algae and other debris from the bottom, so it is a matter of collecting and see in the laboratory whether we caught some copepods, which, hardly ever fails, because copepods are everywhere!

Copepods are difficult to identify due to their small nature, differences between males, females and juveniles’ and the high abundance of different species. Therefore, we rely heavily on genetic barcoding in order to speed up the process of species identification. So, after collecting fresh material, we would make pictures of live specimens to document their unique colors, and then proceed to fixate them for DNA analyses.

Yet unidentified copepod species with beautiful red color, photo credits Cessa Rauch

Winter Wonderland! Photo credits Cessa Rauch

The other projects had a similar workflow so you can imagine, with the little time we got, the Sletvik fieldstation turned into a busy beehive! One week later we already had to say goodbye to the amazing fieldstation, and after a long travel back (even with some snow in the mountains), we finally arrived back in Bergen where unmistakably our work of sorting, documentation and barcoding samples continued!

If you are interested to follow the projects activity, we have social media presence on Twitter (@planetcopepod, @hardbunnsfauna, @norchitons), Instagram (@planetcopepod, @hardbunnsfauna, @norchitons) and Facebook (/planetcopepod /HydrozoanScience).

 

-Cessa

Field work in Biskopshavn

Happy International Day for Biological Diversity 2020!
On this day, we wanted to share a few glimpses of our most recent field work:

We were finally able to – with some precautions in place – resume our field activities again this Tuesday; we had a lovely day trip in the sun to Biskopshavn, a locality just a few minutes drive away from the lab.

Here we collected animals from the shallow sub-littoral (from just below the tide mark to ~3 m depth) for the new project on Copepoda (see more about that here), and for Invertebrate fauna of marine rocky shallow-water habitats (Hardbunnsfauna).

Below is a short video from the field & lab (including the inevitable Littorina on the lam!), and a few of our findings from the day.

This is a polychaete in the family Syllidae. If you look at the tail end on the top image, you can see that it is about to breed: these animals can do so with schizogamy, which is the production of stolons (enlarged in lower image) which are budded off and become pelagic, swimming away to breed. The stolons form complete new animals, but differ from the stock animal in a number of respects, such enlargement of the eyes, reduction of the gut, and different musculature. The stolons die after breeding.

One of the animal groups Hardbunnsfauna is focusing on is the Bryozoa, or moss animals. Pictured is a Bowebankia spp. Due to COVID we haven’t been able to host our international specialists here this spring. We are amassing a nice collection of animals, and do our best to identify them – we will  begin preparing plates for DNA barcoding soon, and then involve the taxonomists once we have the results.

-Katrine, Cessa & Jon

Meet ZMBN 130407!

How much information do you think we have on the animals in our collections? 🤔

Quite a lot more than you might think, and here to help us show you, we have a small snail from the shore. Meet specimen #ZMBN 130407, a Littorina saxatilis 🐌 (rough periwinkle/spiss strandsnegl).

We collected it one year ago on our fieldwork up North, in Tendringsvika near Tjeldsund (Troms): our northernmost station on the trip.

Tendringsvika in Troms

Here’s a short video of the habitat: notice how the sea urchins dominate once we get below the intertidal zone!

To be able to use the Invertebrate Collections for research, we need to know quite a lot about each animal (“specimen”). Standard information would be where, when and how it was collected, who collected it, who identified it (and revisions), notes about the habitat, images if any, and the museum number that it is registered within our database.

A screenshot of how it may look when a specimen is registered in our database

If there is genetic data – like here, a DNA barcode as part of NorBOL – we also need the genetic information. This information is stored in the international barcode library BOLD (BOLDSystems.org), where it is organised in projects containing information linked to the physical specimen, and to the DNA.

Small snail, much data!

If you look at the lower right corner, you will find information about specimens that have identical DNA sequences, and who are therefore grouped together in what is called a BIN in BOLD (/OTU). Most of the other specimens with identical DNA barcode have also been identified to Littorina saxatilis, but not all…that’s one reason to keep the animals in museum collections, so that identifications can be re-checked if needed 🔬.

Through our project (hardbunnsfauna) on shallow water hard bottom fauna from Norway, we are helping build a good DNA barcode library of species that occur in Norway – with reference (“voucher”) specimens in the scientific collections of the University Museum of Bergen, and with our partner, NTNU University Museum.

-Katrine

Science Communication – Creating Scientific Illustrations

What on earth is this going to become?

I (Katrine) recently attended a course on how we can use illustrations to (better) communicate our science.

The course was offered as a joint effort of four Norwegian research schools: CHESS, DEEP, ForBio and IBA, and I got my spot through ForBio (Research School in Biosystematics).

The course was taught by Pina Kingman, and covered a lot of different topics in four days, from messy drawing with charcoal to using graphic software for digital illustrations:

  • Principles of design and visual communication
  • How to apply these principles to illustration and graphic design, which in turn will inform all visual material you might want to create, including; graphical abstracts, presentation slides, poster presentations, journal articles, graphs, data visualisation, project logos, animations and outreach material.
  • Best practices for poster and slide presentation design
  • Step by step method on how to draw your own research
  • Introduction to sketching by hand
  • Crash course in digital illustration with mandatory pre-course digital tutorials

Now, we were sternly told on day 1 that we were not allowed to say that we could not draw…but let’s say that some people have more of an affinity for it than I do – see above for proof! None the less, a concept was to be developed, discussed and improved during group work, and ultimately transformed into a digital illustration by the end of day 4.

Most of my fellow students were creating something related to their ongoing research, such as an illustration to be used in a paper of their PhD. On the last day we presented our work for the class, and got the final feedback from the group. Spending a whole day looking at cool graphics and learning about people’s work on such varied topics as water flow in magma, colour patterns on Arctic rays, better diagnosis of tuberculosis, and ecosystem modelling was really enjoyable, and the feedback I got was very helpful.

I opted for an outreach-approach, creating a lot of small illustrations that will be individually useful in future presentations and such, and which could be combined into a small comic about our scientific collections. The comic has been shared on Twitter and Instagram (do follow @hardbunnsfauna!), and now here:

The end product of the course; a short introduction to our scientific collections, how we work, and how we integrate data such as DNA-barcodes and morphological traits of the animals to do our research!

Thank you to Pina, Mandy (& the other arrangers), and the class for a wonderful learning environment and a fun couple of days!

-Katrine

Field season’s end

Sletvik field station, October 15th-23rd 2019

We wanted to make a write-up of the last combined fieldwork/workshop we had in 2019, which was a trip to the marine field station of NTNU, Sletvik in Trøndelag, in late October. From Bergen, Luis (NorHydro), Jon, Tom, and Katrine (Hardbunnsfauna) stuffed a car full of material, microscopes, and drove the ~12 hours up to the field station that we last visited in 2016.Beautiful fall in Trøndelag

There we joined up with Torkild, Aina, Karstein, and Tuva from NTNU university museum, students August and Marte, and Eivind from NIVA. We also had some visitors; Hauk and Stine from Artsdatabanken came by to visit (if you read Norwegian, there’s a feature about it here), and Per Gätzschmann from NTNU UM dropped by for a day to photograph people in the field.

Most of the workshop participants lined up Photo: Hauk Liebe, Artsdatabanken

During a productive week the plan was to work through as much as possible of the material that we and our collaborators had collected from Kristiansand in the South to Svalbard in the North. Some of us went out every day to collect fresh material in the field close to the station.The Artsprosjekts #Sneglebuss, Hardbunnsfauna, NorHydro, and PolyPort gathered at Sletvik, and with that also the University museums of Trondheim and Bergen. Of course we were also collecting for the other projects, and the museum collections.

One of the things Hardbunnsfauna wanted to do whilst in Sletvik was to pick out interesting specimens to submit for DNA barcoding. This means that the animals need to be sorted from the sediment, the specimens identified, and the ones destined to become barcode vouchers must be photographed and tissue sampled, and the data uploaded to the BOLD database. We managed to complete three plates of gastropods, select specimens for one with bivalves, and begin on a plate of echinoderms, as well as sort through and select quite a few crustaceans and ascidians for further study.

Collecting some fresh material was particularly important for NorHydro because the hydroids from the coasts of Trøndelag have not been thoroughly studied in recent years, and therefore we expected some interesting findings in the six sites we managed to sample. We selected over 40 hydrozoan specimens for DNA barcoding, including some common and widespread hydroids (e.g. Dynamena pumila), some locally abundant species (e.g. Sarsia lovenii) and exceptionally rare taxa, such as the northernmost record ever for a crawling medusa (Eleutheria dichotoma). We also used a small plankton net to catch some of the local hydromedusae, and found many baby jellyfish belonging to genus Clytia swimming around the field station.

Plan B when the animals (in this case Leuckartiara octona) won’t cooperate and be documented with the fancy camera; bring out the cell phones!

It was a busy week, but combining several projects, bringing together material spanning all of Norway, and working together like this made it extremely productive!

Thank you  very much to all the participants, and to all the people who have helped us gather material so far!

-Katrine & Luis