Category Archives: Current projects

Three new species of polychaetes described!

Fresh off the press:

“Diversity of Orbiniella (Orbiniidae, Annelida) in the North Atlantic and the Arctic“,
published in ZooKeys. DOI: 10.3897/zookeys.1205.120300 (link goes to paper, it is Open Access)screenshot of the paper header

In this recent publication, PhD candidate Miguel and his co-authors present three new species of marine bristle worms (polychaeta) in the family Orbiniidae, all from the genus Orbiniella.
The work focused on studying the diversity of the group from the North Atlantic and the Arctic, and has used a combination of molecular and morphological analyses.

The new species have been named Orbiniella parapari, Orbiniella griegi,  and Orbiniella mayhemi. The choice of names (etymology) goes as follows:

  • O. parapari: This species is dedicated to the Spanish polychaetologist Dr. Julio Parapar, who described the first Orbiniella species in the North Atlantic waters, Orbiniella petersenae Parapar, Moreira & Helgason, 2015.
  • O. griegi: This species is named in honour of Edvard Grieg, the Norwegian musician born and raised in Bergen, the city where the present study was conducted.
  • O. mayhemi: The species is named in honour to the Norwegian Black Metal band from Oslo, Mayhem, one of the bands that most contributed to the development of the Norwegian Black Metal in the 90-s. MAM was listening to their music to endure the darkest hours in the lab.

This may the first time classical composer Edvard Grieg and infamous black metal band Mayhem are presented as closely related?

A scientific illustration with B&W SEM images of a small worm

Figure 7  from the paper, showing details of Orbiniella mayhemi Meca & Budaeva, sp. nov. Image credit: Miguel A. Meca et al. 2024, CC BY 4.0

Citation: Meca MA, Kongsrud JA, Kongshavn K, Alvestad T, Meißner K, Budaeva N (2024) Diversity of Orbiniella (Orbiniidae, Annelida) in the North Atlantic and the Arctic. ZooKeys 1205: 51–88. https://doi.org/10.3897/zookeys.1205.120300 (link)

Project ParaZoo: there is a critter inside my jellyfish!

ParaZoo (complete name ‘Metazoan parasites of non-crustacean zooplankton’) is one of the most interaction-focused projects currently running at the Invertebrate Collections of our Museum. This project, funded by the Norwegian Biodiversity Information Centre (Artsdatabanken), aims at studying the different animals that live together inside and on the surface of Norwegian jellyfish. This means that for the next two years we will be looking for tapeworms, flukes, roundworms, and amphipods as ParaZoo tries to answer the question of which of these organisms are associated with gelatinous hosts in Norwegian waters.

ParaZoo is focused on animal parasites and symbionts associated with jellyfish. Thse parasites include roundworms like Hysterothylacium aduncum (left, in Euphysa aurata), amphipods like Hyperia medusarum (middle, on Aequorera forskalea), and flukes like the members of family Didymozooidae (right, in Beroe gracilis). IC: Aino Hosia (left), Katrine Kongshavn (middle), Joan J. Soto-Àngel (right).

Besides jellyfish, arrow worms (Chaetognatha) are also members of non-crustacean zooplankton that host different types of parasites, like this H. aduncum roundworm (Nematoda). IC: Joan J. Soto-Àngel, Luis Martell.

Parasitism and symbiosis are extremely common life styles in the animal kingdom. In fact, some researchers believe that there may be more species of parasites than of free-living animals, given that each free-living species hosts many species of parasites (most of them unique) and those parasites also host their own parasitic tenants. Marine zooplankton is no exception to this trend, and many parasites and symbionts are expected to occur in copepods, krill, and gelatinous zooplankton. Jellyfish and arrow worms, for example, may be important hosts for flatworms and other helminths, yet our knowledge of these animals in Norway is very scarce.

ParaZoo’s logo includes two of the target taxa of the project: roundworms (Nematoda) and hyperiids (Amphipoda). The third main parasitic group covered is flatworms (Platyhelminthes), illustrated by the larvae of Derogenes varicus parasitizing Halopsis ocellata shown in the right side of this figure. IC: Joan J. Soto-Àngel, Luis Martell.

Understanding zooplankton parasites is important because many of them are going to be transmitted to fish, where they may cause serious diseases. To get a better overview of which critters live in non-crustacean zooplankton, ParaZoo will sample, record, and DNA-barcode specimens from all over the country. The collected animals will be included in our museum collections after being identified, documented photographically, and fixed in ethanol. We will then generate an open-access database of information including pictures and DNA sequences that will help with the identification of the parasites. Aquaculture facilities, fishermen, and managers of marine areas will benefit from this database to better plan and counter potential negative impacts caused by the parasites.

Flukes, such as Opechona spp, parasitize gelatinous zooplankton (in this case a sea-gooseberry Pleurobrachia pileus) as larvae called metacercariae. IC: Joan J. Soto-Àngel, Luis Martell.

The larvae of tapeworms (Cestoda) sometimes use jellyfish to reach their definitive hosts: fish. IC: Joan J. Soto-Àngel, Luis Martell.

ParaZoo is committed to present the diversity of jellyfish parasites to all those not familiar with them. In order to do that, we will regularly write entries here on the blog, as well as participate in several academic and not-academic meetings. The official info webpage for the project is available here, so don’t forget to check it out!

–Luis

Hydrozoan team at ForBio 2022 annual Meeting

Do you remember that feeling of dread before you must present in class about a topic you didn’t really study for? Your mind racing, trying to scramble a coherent story to tell the sea of eyes fixed expressionless on you and your powerpoint? We believe we all have at least one memory of this from our days in college.

That was a similar feeling to what we felt on November 28th, 2022, when we had just landed in Trondheim and were on our way to the Norwegian University of Science and Technology (NTNU) for this year’s ForBio Meeting, a 3-day gauntlet where we will present the Master’s projects we’re currently working on. Except this time, we weren’t presenting in a small classroom full of uninterested teenagers thinking about tik tok dances, but in an auditorium full of fellow researchers who work on your same field, and who will probably have extremely difficult questions at the end of your talk. Being the first time we present in an environment like this, one can’t help but imagine all the worst outcomes

And so we’re sitting there, watching the hours and the talks go by, thinking to ourselves “I should/shouldn’t try that for my talk!”. At lunch, all we think about is our talks. When we’re doing some light sightseeing in Trondheim, all we think about is our talks. We’re laying in our beds the night before, and all we think about is our talks. “How will I make my topic sound as professional and knowledgeable as I want to?”, we think to ourselves.

The day arrives, and again the dread starts setting in, right until the moment they call each of our names. At our every turn, we walk down the steps, grab the microphone, and start talking. Except for some reason, this time it feels like we’re in control. The words flow effortlessly; we even crack a joke or two, and the audience laughs. There’s no stumbling around the words like those college days.

Because this time, we’re not the average seat-warming student. This time, we’re the ones that have spent cold and raining hours on a research vessel or diving to get our samples; we’re the ones who have spent hours working together with our supervisors, reading and learning about our topics; we’re the ones who have spent hours looking down a microscope trying to identify our organisms. This time, we’re the ones who know what we’re talking about, and the audience is there to learn from us.

After each of our talks, we give our acknowledgements, and everyone claps. The questions thrown at you are answered effortlessly, and the moment is finished with a thumbs up to our supervisors, returning to our seats smiling.

The most exciting part for us was showing to experts what we do with our favorite invertebrates: Hydrozoans. These organisms are an inconspicuous class in the phylum Cnidaria that most people ignore. Our job was not only to present what we do with them, but to show what they are, what they do, how fascinating they can be and why they are important. And we think that we did a good job.

Now we’re finally free to enjoy the world famous Trondheim bike lift (and the Nidaros Cathedral too), closing the night with burgers, beer and friends.

Everything has been great on this trip and we will always remember the advice from other professionals; how different or similar the work of each one is; and the feeling that you are part of a group of specialists who are excited to share their knowledge with others. But, above all, we have learned why these conferences are important: Knowing what other researchers are doing gives us the chance to collaborate together and help each other, because working as a team is how science moves forward.

The hydrozoa group (and friends) from UiB participating at the ForBio meeting

Pedro, Ana & Håvard

First visit to Bergen for the Cirratulidae project

We had guest researcher Maël Grosse visiting the lab earlier this winter. Here’s a blog post from his stay:

As part of my recently started Artsdatabanken project, I have just completed a month long visit here at the invertebrates collections. It was a lot of work, but also a lot fun. Everyone was very helpful, providing me with worms to identify (a literally never ending supply!), helping me with the scanning electron microscope and spending hours discussing worms and taxonomy. 

My project aims to study and map the diversity of a large family of polychaetes: Cirratulidae. Cirratulids are notoriously difficult to identify, having few characters to work with hidden between the mass of tentacles and branchiae they drag around (Fig. 1). They are quite common and diverse, but poorly known, which is what I am aiming to fix.

Fig. 1. A SEM (Scanning Electron Microscopy) image of a Cirratulid made at the ELMI lab in Bergen.  Photo: Katrine Kongshavn

Bergen Museum has the largest collection of polychaetes in Norway, with samples ranging from the North Sea to the Arctic waters of Svalbard, and from the intertidal coastal waters to the abyssal depths of the North-East Atlantic. And indeed, thousands of cirratulid polychaetes were waiting on the shelves to be identified. As it is the environment I had been working the most with in the past couple of years, for this visit I decided to focus on deep sea species. This led me to check samples from all over the Norwegian Sea, including some unique and exciting environments such as the depths of Sognefjord or hydrothermal vents.

At the end of the month, over 5500 specimens, belonging to about 23 species have been examined (Fig. 2). While the majority could be given an name or a species number (in the case of as of yet unnamed species), many could not be identified with confidence, because they were  incomplete specimens or from an area where a particular species had not been recorded before. There were even two species I think I had never seen before, which is a very good result for the project! In that case, I selected specimens for DNA barcoding, which will help confirming their identity. I have picked out about 300 specimens for barcoding, so now there is quite a bit of work to do back in my home lab to sequence them all.

Fig. 2. Cirratulidae samples at UMB. Photo: Maël Grosse

So in the end, I would say it was very productive visit, and I will certainly be back for more worms!

-Maël Grosse

Final workshop for hyperbenthic copepods (HYPCOP)

Our first international workshop with from ltr; Anders Hobæk (NIVA), Cessa Rauch & Jon Kongsrud (UMB), Tone Falkenhaug (project leader, IMR), Alexandra Savchenko & Rony Huys (NHM), photo by Alexandra Savchenko

During the last week of September, HYPCOP organized its last and crucial workshop for finishing the project. We invited international collaborators Prof. Dr. Rony Huys and Dr. Alexandra Savchenko from the Natural History Museum in London. Prof. Dr. Huys is a well-known copepod taxonomist and crustacean researcher and published a multitude of species descriptions and books including key identification guides. We were very happy to hear he had time to come and travel to Bergen, paying us a visit while also helping us with species identifications of the many, many copepods we had collected during the two years of our project.

 

During the two years of the HYPCOP project we collected around 600 specimens from different localities all over Norway, including shallow coastal waters and the deeper parts of the mid-Atlantic Ridge (Loki’s Castle field of active hydrothermal vents). From all those specimens we extracted DNA from the soft tissue of the animal. Therefore, keeping the hard exoskeletons, for morphological identification downstream. This is the most time consuming and challenging part. The species can sometimes only be identified based on minuscule differences in the appearance of its legs. Besides, one needs good taxonomic competence to assign these differences to the thousands of marine benthic copepods species. And this is where the HYPCOP team needed help.

HYPCOP started in May 2020, when a lot of countries, including Norway, were in a lockdown and international travel was difficult or even impossible. Therefore, it was problematic for HYPCOP to invite international researchers for most of the time. Thus, we focused mostly on extracting DNA from our collected specimens and building up a barcode library. But what was missing was the nomenclature of the bulk of the specimens. When finally, our first international researchers could come and have a look at our specimens, it turned out to be an enormous task. With the help of Prof. Dr. Huys and Dr. Savchenko we managed now to have almost 300 assigned names to our DNA library of 500 specimens. Quite a few of those are new species and even new genera.

Kickoff of the workshop, which would take place at Marine Biological Station Espegrend for the duration of a week, photo by Alexandra Savchenko

Rony and Alexandra arrived Sunday evening in Bergen together with project leader Tone Falkenhaug and project technician Cessa. We were stationed at the Espegrend marine biological station in Bergen for the entirety of the week. It was for Tone and Cessa the first time they would finally meet Rony and Alexandra in person, after many months of digital communication. It was a nice relaxing first evening. The next day Anders Hobæk from NIVA and Jon Kongsrud from the UiB joined and we started off the week with a presentation overview of the project.

The overview informed everyone about the program of the week and the state of the art of the project. With the DNA barcode library, we managed to construct a COI phylogenetic tree. Some of the larger clades were already identified down to species level, but many more species names were missing from the smaller clades. It was up to us that week together with Rony and Alexandra to identify these last cases.

Alexandra onboard research vessel Emiliana, photo by Tone Falkenhaug

We also had one day of fieldwork planned, to have us work also with some fresh material. This we did with help of research vessel Emiliana and the Beyer’s sled. Both stationed at Espegrend Marine Biological station. We tried to pick out a nice and dry day for going out with the boat and that happened to be in the mid of the week. We went a little bit outside of the Biological Station, with a depth of around 90 – 120m. The Beyer’s sled is an epibenthic sampler, it is called a sled for its form. We got many fresh samples, but due the net being a little large in its mesh size, we did not get as many small species as we liked.

 

Therefore, we also tried another sampling method with help of Anders; he had brought with him a light trap. Light traps are very easy to DIY with a bottle and inverted bottle opening, like a funnel, and a small led light on the bottom. You install the trap in the water overnight; the little led light attracts a lot of small hyperbenthic and planktonic (and some bigger) species.

Everyone working hard at the Marine Biological Station Espegrend, assigning species names to specimens, photo by Cessa Rauch

The entirety of the week consisted of many hours working at the microscope, going through literature, dissecting specimens, and assigning species names to the specimens. Eventually with help of Rony and Alexandra, we managed to assign 298 scientific names to 702 specimens in our collection. From those specimens, we extracted DNA from 593 specimens and produced a DNA library, which we uploaded to the BOLDSYSTEMS (Barcode of Life Data System). This library also has all the metadata of our specimens, such as location, depth, size, and pictures of the specimens (either life, fixed and in some cases parts). And it will be publicly available at the end of the HYPCOP project.

The week was demanding but very rewarding and we got many specimens identified, with even a few new species and genera to Norway and possibly new to science; all thanks to the hard work and help of Rony and Alexandra. We therefore also would like to take this opportunity to thank them again for their time and efforts in helping the HYPCOP project move forward! Until next time.

Rony Huys and Alexandra Savchenko helping the HYPCOP project move forward, photo by Tone Falkenhaug

– Cessa

Unraveling copepod secrets one leg at a time

A blog by HYPCOP

Hyperbenthic copepods (HYPCOP) are a very difficult and diverse group to work with, and identification goes painstakingly slow, because some species can only be distinguished from one another based on small details in some of their tiny legs. As of now, we have no specialists in marine benthic copepods in Norway and our greatest resource is our collaborator Anders Hobæk and the detailed drawings of G.O. Sars from the early 1900s .

Working together under guidance of G.O. Sars and Anders Hobæk

Anders is a senior researcher scientist at the Norwegian Institute for Water Research (NIVA) here in Bergen. He is specialized in copepod taxonomy, but his focus was mostly on freshwater copepods, or marine pelagic copepods. Which makes the marine benthic copepods just a little bit more challenging to work with, however, his skills are transferable and so we get together multiple times a year to work on our collection of benthic copepods to dissect them and identify them.

Beginning of June, we had again one of those get togethers in Flødevigen at the Institute of Marine Research (IMR), where Tone Falkenhaug, the project leader of HYPCOP, is situated. For a week we went through the main clades and groups of species that we had DNA barcodes of but not yet a confirmed species name. A lot of the identification was done with help of the rich and detailed illustrations of G.O. Sars1 published work in 1901 – 03 and 1919 – 21, “An account of Crustacea of Norway”

Detailed copepod drawings from G.O. Sars

Sars dedicated a lifetime of identifying and describing a variety of species and he did not neglect the rich and wonderful group of bottom dwelling copepods. Every species he encountered in those early days he described and drew in detail; he did not leave out the smallest details, that as of now, turn out to be of uttermost importance in determining the species. With small copepods you need a good microscope and fine tools. The first thing to look at is the general shape, is it very dorsally flat, like Peltidium purpureum, or more dimensional like Harpacticus flexus?

Sex is also an important feature; females are often characterized by carrying eggs; one egg sack or two egg sacks can already lead you in the right group. Males have often larger antennule made for holding on to females when mating, and other specialized tools that can be species specific. The little claws, called maxilliped, are they large, small, almost invisible? What about the first pair of legs? The second, third and fourth? The fifth pair of legs is often very characteristic for the species and in certain females, like Thalestris longimana, can be a huge in comparison of the rest of its body.

Thalestris longimana, females of this species has relatively large fifth pair of legs

Our work has a continues workflow consisting of, collecting the copepods, extracting their tissue for DNA barcoding, and keeping the exoskeleton. Once the DNA is successfully sequenced, we can take the exoskeleton and dissect the animal leg by leg to finalize the identification. That way the copepod is identified based on its DNA and morphological features, as this is not always mutually exclusive. DNA can be tricky as you need a good reference library to find the correct species, which is as of now, not complete, or even lacking for many species. Besides, there is such things as DNA contamination, cross contamination between species, therefore you always must look at the morphology to exclude that the DNA gives you the wrong species. Together with images of the animals we are building up a valuable reference library of DNA sequences and a museum collection of dissected animals on fixed slides. This way copepod diversity will continue to be valuable for future generations top study.

Working under the eyes of G.O. Sars

-Cessa

1Sars, G. O. 1901-03. An Account of the Crustacea of Norway. Vol. IV. Copepoda Calanoida.- Bergen Museum, Bergen & Christiana. 171 pp. + 109 plates Sars, G. O. 1919-21. An Account of the Crustacea of Norway. Vol. VII. Copepoda. Supplement. – Bergen Museum, Bergen & Christiana. 121 pp. + 74 plates

Fieldwork for two projects

The projects HypCop (bottom-associated copepods) and Hardbunnsfauna (Invertebrate fauna of marine rocky shallow-water habitats) went on a day-trip to three localities last week.

We made the most of the sunny and calm weather to visit a very exposed site on Sotra, where we collected in the tide pools and on the barnacle-encrusted intertidal.

Afterwards, we went to two marinas, Glesvær and Hjellestad, on a quest for some specific species the projects were in need of.

Back in the lab we set to work documenting the colours of the animals by photographing them alive, as the colours tend to face in fixatives.

It was nice day in the field, and it looks like we found the species we were after!

Follow us on Twitter and Instagram as @PlanetCopepod and @Hardbunnsfauna

– Jon, Cessa & Katrine

 

HYPCOP workshop in Flødevigen

From the 7th to the 11th of March the HYPCOP team once more sat together to work on the identification of the species we have in the collection. The strategy was similar as we had in Bergen last year, but this time we looked focus into specific clades. Besides, we met in Flødevigen this time, instead of Bergen, and visited Tone Falkenhaug at her jobsite with the Norwegian Institute of Marine Research (IMR, Havforskningsinstituttet).

The HYPCOP team in Flødevigen, from ltr; Cessa Rauch (UiB), Jon Kongsrud (UiB), Anders Hobæk (NIWA) & project leader Tone Falkenhaug (IMR).

One way for identifying species of hyperbenthic copepods is by looking at their colors. Unfortunately, these get lost as soon as you fixate the samples in technical ethanol. Therefore, we started the workshop with a short sampling trip just out of the bay in front of the research station. We took a small boat from the research station that had a manual operated hinge on the back of the boat, so we could use that for pulling up the grab.

Preparing the small IMR boat with use of the manual hinge and the grab.

Anders Hobæk operating the grab

One of the advantages of working with tiny animals is that you sometimes only need small gear to collect them. The grab we used is hand size grab, not much bigger than a 10L basket.

However, as it is made entirely out of metal it is still heavy, which ensures it will be able to “grab” the mud from the bottom when it hits the sea floor.

Once we arrived at a nice location with the boat, we placed the grab over the edge of the boat and let it sink to the bottom which was about 40m deep.

Once the grab would touchdown it would close and engulf softbottom material including the animals that are associated with it. The closed grab would be town back with the manual hinge from the boat. Once onboard, we would empty the grabs content in a bucket and sieve some of the material. This material would go back to the lab for examination.

We carefully examined the sediment, and it was not yet very rich with benthos. We caught a few interesting copepods species, that we documented and fixated for identification.

One of the species we caught with the grab

March is not the best season for benthic copepod sampling, the water is still very cold from the winter and most of the small algae needs to grow back. Benthic copepods are much more abundant with rising temperatures and lots of algae growth. Back in the laboratory we started working on our museum collection copepods and assigned clades in our family tree that we would examine first.

Tone Folkenhaug (left) and Anders Hobæk (right) concentrated with dissecting copepods.

Bigger clades had more priority, and so we took those samples and checked the individual specimens. All the specimens we had in our collection are exoskeleton remnants from the DNA extraction (hence we could have a phylogenetic tree). The exoskeletons are still good for morphology identification but hard to see (due to there translucent nature). Therefore, to help with the identification we would often stain the exoskeletons either with lactophyl blue or lignin pink, which resulted in a visually pleasing collection of prepared slides of different colors.

Slides of Lactophyl and lignin pink stained copepods

Thanks to the workshop we now have manage to identify 145 out the 580 specimens; our efforts for identifying will continue and a new workshop is already planned, we meet again in June and in September, with also this time, help of international researchers!

Stay tuned with @planetcopepod!

-Cessa

Legendary colleagues meet once again; in search of Idzi Drzycimskis harpacticoids with help of R/V Hans Brattström

R/V Hans Brattström. Photo: Anne Helene Tandberg

Professor Dr. Idzi Drzycimski was one of the few who studied copepods here in Bergen, and in particularly the order of Harpacticoida. Drzycimski was foremost an occupied oceanologist and ichthyologist (the study of fish), but during his career he also described several new species from the order Harpacticoida. A few of those records are from Norway and are currently an important resource for our study of hyberbenthic copepods (HYPCOP). Drzycimski stayed in Bergen for a few years during the sixties and build up an extensive collection of copepods.  

 

Idzi Drzycimski 

Idzi Drzycimski was born December 5th, 1933 in Klonowo; a very small village North of Bydgoszcz, Poland. He studied Biology with a specialization in Hydrobiology at the Odessa University of I.I. Miecznikow. In 1957 he graduated and started working at the Sea fisheries Institute in Gdynia at the Oceanography Department, led by Professor Kazimierz Demel. Later followed by a career at the Department of Oceanography and Marine Biology at the University of Agriculture in Olsztyn, Faculty of Fisheries. In 1963 he obtained the degree of Doctor in natural sciences and in 1969 he habilitated. In 1985 he received the academic title of associate professor and eventually became full professor in the same year.

Drzycimski publication in Sarsia about new species of copepods.

Throughout his career he completed several internships in Germany, Norway, Italy and participated in several research cruises in the South Baltic Sea, North Sea and the Norwegian Fjords. During these cruises he collected and described 11 species new to science and 3 new types of marine crustaceans that have entered into the international zoological systematics. He promoted 8 doctors and continued to be the head of the department of oceanography at the faculty of sea fisheries. All while he published hundreds of articles and finally in 2001 he was awarded the Medal of Professor Kazimierz Demel.

 

 

Sampling for copepods 

As noted earlier, HYPCOP uses Drzycimski works for the project; his database, collection and publications from his years in Bergen are good source of information. Drzycimski published two publications with Harpacticoida findings from 1967 and 1968. He described 5 new species of Harpactcoida from West Norway, with sampling locations close to Bergen. Now, half a century later, we wanted to revisit these sampling sites to see if we could find the same or different species. Some off the sampling locations were from the middle of the fjords near Bergen and would therefore be excellent to revisit.  Drzycimski had sampled different spots from around the Krossfjorden, Bjørnefjorden and Raunefjorden. Most of these were deep sandy and muddy bottoms, from around 300-700m. Species that he had found there he described as Marsteinia typica, Pseudotachidius vikingus, Marsteinia similis, Leptopsyllus elongatus and Dorsiceratus octocornis. These all have the typical small body sizes of around 400-800 μm and are very inconspicuous and hard to find with the naked eye.  

 

Brattström & Drzycimski 

 

Beautiful day for sampling benthos. Photo: Cessa Rauch

With help of research vessel Hand Brattström and researcher Anne Helene Tandberg, we managed to sample two locations in the Krossfjorden between 400-700m depth that were sampled before in the 60s by Drzycimski. Prior to the sampling day we made a hit list of 4 locations that we wanted to revisit, but two of those locations got inaccessible. In the span of 60 years a lot of things have changed, places that once where easy accessible for sampling are nowadays littered with e.g. fishing gear waste. Which would destroy our plankton nets when they get stuck in this. On top off that Drzycimski also did not describe in his papers how he managed to collect his copepod samples, but most likely this was done with a sled, and in this case we would be using the R.P. sled. The R.P. sled is an epibenthic sampler. That means that it samples the

Anne Helene Tandberg and crew working on retrieving samples from the RP-sled. Photo: Ellen Viste

animals that live just at the top of the (soft) seafloor with a fine plankton net, if you want to read more details about the R.P. sled you can read that here. Once again our sled expert Anne Helene would join us on this trip to help HYPCOP with sampling and also to be on the lookout for sampling for amphipods. After the sled collected the benthic animals, we needed to filter the sled sample by a process which is called decanting (See the YouTube movie in this blog).  With decanting you separate the mixture of the animal soup from the liquid by washing them in a big bucket, throw the liquid through a filter and collect the animals carefully to avoid damaging them.  

 

 

 

 

Drzycimskis visit at the museum was during the years of Hans Brattströms Professorship at the University of Bergen in marine biology (1962-1978). During those years Brattström started the scientific journal Sarsia, where Drzycimski published his copepod species description’s. There is not much about whether the two professors knew each other well, but it is very likely. And so it was special that few generations later, Hans Brattström once again facilitates research for Drzycimski, although this time as a research vessel and a new generation of scientists working on marine benthos.  

New generation of scientists working on marine benthos. from the left: Anne Helene Tandberg, Francisca Carvalho, Cessa Rauch, Ellen Viste and Justine Siegwald

Cessa & Anne Helene 

Literature:

Drzycimski, I. “Zvvei neue Harpacticoida (Copepoda) aus dem Westnorwegischen Kdstengebiet.” Sarsia 30.1 (1967): 75-82. 

Drzycimski, I. “Drei neue Harpacticoida aus westnorwegen.” Sarsia 36.1 (1968): 55-64. 

Throwback Thursday; HYPCOP workshop at the museum

The project of studying hyperbenthic copepods (HYPCOP) is unique in multiple ways; we study a very unknown group of marine copepod species with very little taxonomic knowledge available here, in Norway. It is challenging as there are more than 700 species described, and possibly more. With pandemic lockdowns, it was hard to have international specialists come and help us, so we had to rely on resources available locally. With so many institutes involved from different corners of Norway, it was not always easy to meet up physically to work on our collection. Hence, when it happens, it is a memorable event, and valuable progress for the project is made.

One of the many species of copepod we have here in the collection at the UiB museum

We have Tone Falkenhaug as the project leader, situated at the Institute of Marine Research in Flødevigen (IMR), than we have our collaborator from Norwegian Institute for Water Research (NIVA), Anders Hobæk and the three technicians at the department of natural history from the University of Bergen. The year before we all got together in Flødevigen, so for 2021 we decided that it would be Bergen to have another workshop.

From ltr; Anders Hobæk, Cessa Rauch, Tone Falkenhaug and Francisca Carvalho making the picture

A year into our project we managed to build up a substantial collection of benthic copepods; currently we have around 460 registered specimens, and 195 off those are barcoded with two different DNA markers, mitochondrial (COI) and ribosomal (16S). What keeps ahead of us is the monster task of working through our specimens to label the DNA barcodes with morphological identifications. It means many hours of very precise work with the finest needles, while sitting at the microscope.

During our workshop in Bergen we got together to work through one of the copepod family trees we generated from their DNA:

Preliminary tree of the COI mitochondrial marker

Anders Hobæk is a taxonomist with many years of experience dissecting copepods, and together we went through the samples one by one. It is very satisfying to be able to identify a specimen and get the to the same species level as the DNA barcode. There are multiple reasons as why we choose to identify species based on morphology.

Not all species are easy to barcode, as copepods, especially the benthic ones, are often so extremely tiny; it is difficult to get good quality DNA extracted from them.

Copepods are tiny; this one with scalebar

The small quantities of copepod DNA goes hand in hand with greater risk of contamination of other surrounding DNA, especially if you work with more general markers. Besides, even if we have the DNA barcode, not all copepod DNA is identified as such, which means that even with the right DNA, when running it through the database, it tells us that we have fly DNA, to give an example. Last but not least, in a lot of cases, we were not able to get good DNA sequences from the copepod extracts, so the only option is identifying them morphologically, by dissecting the animals and with help of literature identify the right genus, or even better, the species.

Species identification with help of literature, here a page from G.O. Sars

Our next workshop shall take place again in Flødevigen, in the meantime we keep you updated about our planet of the copepods.

Follow us for more copepod content @planetcopepod, see you there!

 

-Cessa