Category Archives: Photography

Door #4: A cushioned star

This gorgeous sea star was first described by O.F. Müller in 1776. He gave it a species name fitting the characteristic appearance of the animal (Lat. Pulvillus= pillow, cushion). The common names in both English – Red Cushion Star- and Norwegian – Sypute – also reflect on this. Though most commonly red like the specimen pictured below, they can also be yellow-white. The white protrusions on the upper side the are gills. It lives at 10-300 meters depth, where it is often seen feeding on the coral Alcyonium digitatum. This particular specimen was collected during the course in marine faunistics this fall, in a locality just outside our field station close to Bergen.

Porania-001 ZMBN_106039_2Strangely enough, considering how common, conspicuous and wide-spread the species is, it has not been barcoded very frequently in BOLD – our specimen here will be the fifth in total to be submitted..!

Screen shot from a search in BOLD for the species

Screen shot from a search in BOLD for Porania pulvillus

-Katrine

Door #3: Prepare to be HYPNOtized

One of this year’s new projects at the Invertebrate collections is HYPNO – Hydrozoan pelagic diversity in Norway, funded by the Norwegian Taxonomy Initiative.

A selection of photos depicting some of the species encountered so far in the project

A selection of photos depicting some of the species encountered so far in the project

Hydrozoa are a class of cnidarians, the pelagic representatives of which include hydromedusae as well as colonial siphonophores and porpitids. They are thus “cousins” to the more familiar larger scyphozoan jellyfish such as the moon jelly or the lion’s mane jelly. The size of pelagic hydrozoans ranges from small medusae of less than 1 mm to siphonophore colonies reaching several meters in length. They are mostly predators that use their tentacles and stinging cells to catch other zooplankton or even fish larvae. Most of the time they go largely unnoticed by the public, but at times they can form blooms and deplete zooplankton as well as cause problems for aquaculture and fisheries or sting bathers.

The aim of HYPNO is to chart, document and DNA-barcode the diversity of hydromedusae and siphonophores occurring in Norway. Gelatinous zooplankton, including hydrozoans, has been generally less studied than their crustacean counterparts, and we know less about their diversity. This is due to several challenges in studying them. First of all, many pelagic hydrozoans, particularly the colonial siphonophores, are very fragile and often damaged during sampling with standard plankton nets. This can make it difficult to identify them. Secondly, preserving hydromedusae and siphonophores for later work is problematic. For morphological studies, they are best preserved in formalin, since most other fixatives used for zooplankton -including ethanol- cause distortion and shrinkage of their gelatinous bodies, rendering the animals impossible to identify. Formalin fixation, however, hinders further genetic work.

To overcome these practical problems, HYPNO uses gentle collection methods to obtain specimens in good condition. Collected samples are immediately examined for hydrozoans, and the live animals are identified and documented with photos before they are fixed in ethanol for DNA barcoding of CO1 and 16S sequences.

So far, HYPNO has participated on two cruises by the Institute of Marine Research: to the North Sea and Skagerrak on RV Johan Hjort 24 Apr – 4 May 2015 and to the Arctic Ocean and Fram Strait on RV Helmer Hanssen 17 Aug – 7 Sep 2015. So far, 34 species have been photographed and sampled for DNA. Here is a selection of pictures depicting some of the species encountered during these surveys.

You can read more about HYPNO at http://data.artsdatabanken.no/Pages/168312.

-Aino

Door #1: A day at sea

Welcome to our marine invertebrates December calendar! In Norway it is very common for children to have a Advent calendar of some sort to help shorten the wait towards Christmas.

We’ve decided to run with the idea here on the blog, giving you a tidbit about our work every day from December 1st to 24th.

We hope you’ll join us on our little venture – we can guarantee a varied selection of topics!

All the posts will be gathered under the Category 2015 December calendar

First out is a tale of sampling in the sleet…!

The scientific collections are the backbone of all the research performed at the University Museum – as it is at any museum. They hold treasures collected through the entire lifetime of a museum, and most times a collection was the reason for the establishment of a proper museum. The University Museum of Bergen is one of the oldest natural history collections in Norway, and we have grand collections.

But a collection needs to live – to be added to and to be used of – and this was the reason that bright and early Monday morning Katrine and Anne Helene were ready to go to sea. Our goal was to make a jumpstart at Anne Helenes new project about Amphipods (more about that in a later blog), and to take a grab (or two) of sandy seafloor to look for bristle worms (Polychaeta).

It is always a risk planning on a cruise in the very end of November, but this time the weather was on our side. Our plan – “go out and grab animals, sandy bottom is nice” – was cooked up in the spur of the moment  when we got an offer for boat time late Friday afternoon (someone else had to change their plans in the last minute), and maybe that was why everything went so smoothly? Going out collecting benthic animals (those that live on the seafloor) is one of our favourite things, and so we didn’t need much prodding.

The grab and sledge performed beautifully, and now is the time for sorting and photographing live animals before adding them to the collection. Be sure to follow their story through later blogs – they will show up in the categories NorAmph and NorBOL, and maybe somewhere else as well?

 Katrine and Anne Helene

Make sure to check back tomorrow to see what is behind Door #2…!

Greeting from the Faunistics course!

Todays cutest catch - he's a Rossia cephalopod

Today’s cutest catch – he’s a Rossia cephalopod

 

I’ve spent both last week and the current one at the UiB field station – Espegrend – together with an enthusiastic bunch of marine biology master students and their teachers.

Espegrend

Espegrend

I am mainly here to collect animals for NorBOL, but it’s hard to resist the temptation to join in on the course itself every now and again – whether in the field or in the lab!

Lots and lots of litterature

Lots and lots of litterature

 

The baseline for the course is that the students will get to look at all sorts of freshly collected animals from various habitats and learn to identify them.IMGP0626

Kelp tank

Kelp tank

Identified samples - at the end of each day, the students present the animals that they have studied that day to their classmates.

Identified samples – at the end of each day, the students present the animals that they have studied that day to their classmates.

Whilst doing so, they acquaint themselves with the different keys and terminology used to identify the critters, learn which species are associated with which habitats, and get practical experience of how to collect and treat samples of various kind (you would for example use a different kind of gear to collect on a muddy substrate than on a rocky slope).

So it is a busy couple of weeks, with lots to learn.

Work on deck

Work on deck

IMGP0667

Sponge-ID

First day in the field, Henrik is demonstrating

First day in the field, Henrik is demonstrating

Incoming sample!

Incoming sample!

Tomorrow is the final day of collecting (it will be “parasite day”, which means a trawl to collect fish and various other animals likely to have parasites on (or in!) them.

Today we have focused on sponges, yesterday it was zooplankton, Monday was polychaetes – and so it goes!

 

 

 

 

 

 

Here are some of the animals that we have been working on:

 

The weather last week was…interesting, as was the absolute downpour a student and I went out in Monday morning – but today was simply a beautiful day for field work!

Stormy weather! Thankfully it passed after the first week.

Stormy weather! Thankfully it passed after the first week. The map is from the really cool page earth.nullschool.net

Much, much nicer weather

Much, much nicer weather

As well as (re)presenting the Museum (yes, we do other things than the exhibitions, and ye-ees, we are interested in new students!), I gave a presentation of NorBOL and the work we are doing on marine animals last week (so far it is only animals, we will start with the marine macro algae the coming spring).  I have been collecting quite a few new species that are to be barcoded from what the students work on, as well as supplementing what we have. In addition I will bring back some nice (but so far unidentified) samples to the Museum that we will continue to work on.

And who knows – maybe I have recruited some future collaborators?

The 1st International Polychaete Day!

Mystides sp Arne Nygren CC-BY-SA

Mystides sp Photo: Arne Nygren CC-BY-SA

Nereiphylla lutea Photo: Arne Nygren CC-BY-SA

Nereiphylla lutea Photo: Arne Nygren CC-BY-SA

Welcome to our contribution to the very first International Polychaete Day!

Today, we want to share information and photographs of these amazing creatures that usually reside in the deep blue, and who therefore haven’t gotten the public attention that they deserve (until now!). The event will take place world wide, starting at the Australian Museum in Sydney and move through the time zones where it will be celebrated in Russia, Norway, the UK, and in the USA – amongst others!

Dorvillea rubrovittata Photo: Arne Nygren CC-BY-SA-NC

Dorvillea rubrovittata Photo: Arne Nygren CC-BY-SA-NC

Kristian Fauchald

The celebration has been initiated as a way to commemorate Kristian Fauchald, a key figure in the polychaetologist community for many years.

Kristian Fauchald

Kristian Fauchald (1935-2015). Top and bottom right photos from the International Polychaete School held at the White Sea Biological Station of The Moscow State University in 2011, © A. Semenov. Bottom left: from Kristian’s public lecture in Moscow in 2011 © Dynasty Foundation

"The Pink Book", more properly known as Fauchald, K. 1977. The polychaete worms, definitions and keys to the orders, families and genera. Natural History Museum of Los Angeles County: Los Angeles, CA (USA) Science Series 28:1-188, available online at http://www.vliz.be/imisdocs/publications/123110.pdf

“The Pink Book”, Fauchald 1977

Amongst many other achievements, he was the author of the famous “pink book”, which has served as an introduction to the world of polychaete taxonomy for many of us.

Kristian was born in Norway in 1935, and studied biology at the University of Bergen until beginning his doctorate work in California in 1965. An obituary by Fredrik Pleijel and Greg Rouse can be found at the World Register of Marine Species (WoRMS), which he was a founding editor of:
Obituary – Kristian Fauchald

He had a big, hearty laugh, a even bigger heart and a keen interest in the world around him – and he will be sorely missed.

Today, the 1st of July 2015, would have been Kristian’s 80th birthday, so it seems an appropriate day to blitz the public with an appreciation for the amazing animals that Kristian loved so much.

IMG_0044_1_red © UiB

                                                                      The Annelida

The Phylum Annelida, the “ringed worms”, includes two classes, the Polychaetae and Clitellata (Subclasses Oligochaeta and Hirundinea). Annelids typically have a slender cylindrical body (with a head in one end and an anus in the other), and externally visible annulations along the body – think of an ordinary earth worm (who belong in the Oligochaeta), and you have a typical annelid! The polychaetes are extremely common in the marine environment, from coastal areas to the deepest areas of the world oceans. These days, scientist are working on unravelling the family tree of the Annelida, if you are interested you can start reading about the phylogeny of annelid evolution here (Struck et al 2011).

Polychaetes

The Polychaeta (Gr. Polys = many, Lat. chaeta = bristle), or bristle worms, often have – as the name suggests – conspicuous chaeta or bristles along their body. The bristles are found on parapods; locomotory structures typically found on each side of the body segments. They can be simple, hairlike structures, or they can be much more complex – as pictured below.

Details related to the types of bristles provide in many cases important taxonomical characters, and identification of species often requires observation of bristles in a regular microscope. Scanning Electron Microscope (SEM) is used to examine the finest details of the bristles when we are working on describing species – the photos below are taken using SEM.

Ampharete undecima. One of the tools used when describing a new species is the electron microscope, which allows us to take very detailed photographs of the animals. Photo: K. Kongshavn

Ampharete undecima. One of the tools used when describing a new species is the electron microscope, which allows us to take very detailed photographs of the animals. Photo: K. Kongshavn

There are more than 12 000 described species of polychaetes, and the vast majority of these are marine.

They live from the intertidal to the abyssal (all the way to the bottom  of the Mariana trench, at approximately 10.970 meters depth! More here)

Polychaetes come in a wide variety of shapes and sizes, from “Barry the giant sea worm” at 1.2 m (!) to minute species like Ampharete undecima, the new species we described last year which is up to 5 mm in length. They range from fast, predatory hunters to burrowers and tube-dwellers.

The Australian Museum in Sydney – which hosted the previous International Polychaete Conference – har written a nice introduction to the polychaetes on their web page, you will find it here

Group photo of the assembled polychaetologists in Sydney in 2013 (photo  © the IPC 2013 crew)

Group photo of the assembled polychaetologists in Sydney in 2013, Kristian is sitting next to the left column (photo © the IPC 2013 crew)

Amblyosyllis Arne Nygren CC-BY-SA-NC

Amblyosyllis Arne Nygren CC-BY-SA-NC

There are about 700 described species of polychaetes occurring in Norwegian waters – and the number is steadily increasing, as new species are being described every year, together with new occurrences for known species. Cryptic species – two or more morphologically similar species that erroneously have been classified as one – are also abundant in polychaetes, raising the species count even further.

 

Research

There is a substantial amount of ongoing research taking place, and at the University Museum the focus is on polychaete taxonomy:
ActionbilderOur scientific collections  are of course of vital importance as a source of material and data dating back all the way to  “Den Norske Nordhavs-expedition, 1876-1878” (book 1 can be found here) and the 1910 Michael Sars Expedition (“The depths of the ocean : a general account of the modern science of oceanography based largely on the scientific researches of the Norwegian steamer Michael Sars in the North Atlantic“). For an account of some of the earliest collections and taxonomic works on the Norwegian polychaete fauna and how it ties in with present work, see Oug et al 2014.

However, there is always a need for new material, and we do a fair bit of collecting ourselves, especially in the Bergen area. Above are some action shots of us collecting in the local fjords.

We are currently in the final year of the 3-year project “Polychaete diversity in the Nordic Seas – from coast to abyssal”, affectionately nicknamed PolyNor. You can find information about PolyNor workshops and work taking place at the University Museum by clicking here. This project is financed by the Norwegian Biodiversity Information Centre, and relies heavily on fresh material collected by the MAREANO-project (Marine AREAl database for NOrwegian waters).

norbol logoThrough the Norwegian Barcode of Life (NorBOL) project, we are working on building a comprehensive library of genetic barcodes: short, species specific DNA sequences. Polychaetes are a focus group here, and so far we have submitted 1900 samples collected in Norwegian waters. Unfortunately, polychaetes are tricky costumers when it comes to genetic barcoding, and we are working on increasing the success rate. So far we have barcodes on about 70% of the species we have submitted, but as only 40% of the samples result in barcodes, a significant proportion of the diversity is still missing. We have also barcoded quite a lot of African polychaetes through our MIWA-project (Marine Invertebrates of Western Africa). Below are two maps with pins showing the localities that we have submitted polychaetes from for barcoding in the BOLD database.

Efforts are ongoing on the taxonomy of both Norwegian and West African polychaetes – we can for certain say that “more research is needed!” on the topic.

Location of polychaete samples submitted from UM to BOLD

Location of polychaete samples submitted from UM to BOLD

The University Museum also participates in the education of polychaetologists for the future: One of our students defended his Master of Science on taxonomy of the genus Diopatra in the family Onuphidae last Friday, you can read more about that here.

To sum up, polychaetes – bristle worms – are fascinating animals that have adapted to a wide variety of habitats and modes of life. They are incredibly diverse, are important parts of the marine food webs, they help turn over sediments (like earth worms do on land), they can build reefs with their tubes, and they even have their own International Day!

Melinna sp photo K Kongshavn ©UiB

Melinna sp photo K Kongshavn ©UiB

Below you will find a slideshow featuring some of the amazing polychaete diversity, we hope you will enjoy it!

[slideshow_deploy id=’1132′]

 

 If you would like to see how other institutions are celebrating today,

then head over to Twitter and the tag 

#InternationalPolychaeteDay

Selected references:

Alvestad, T., Kongsrud, J.A., Kongshavn K. (2014) Ampharete undecima, a new deep-sea ampharetid (Annelida, Polychaeta) from the Norwegian Sea  Memoirs of Museum Victoria 71 :11-19 (2014) Open access

Fauchald, K. 1977. The polychaete worms, definitions and keys to the orders, families and genera. Natural History Museum of Los Angeles County: Los Angeles, CA (USA) Science Series 28:1-188 Available online at http://www.vliz.be/imisdocs/publications/123110.pdf (this is “the pink book”!)

Oug E, Bakken T, Kongsrud JA. 2014. Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars. Memoirs of Museum Victoria 71: 217-236. Open Access.

 

Thank you to Nataliya Budaeva for supplying photos of Kristian, and to Arne Nygren and Fredrik Pleijel for polychaete photos!

Workshop aftermath

IMGP0475The lab is rather quiet today, compared with the frantic activity of last week – but there’s still plenty of work to do! We’ll catalog the identified material – several hundred entries – into our museum collections.

For NorBOL, a total of 250 polychaete specimens from 154 different species were selected for genetic barcoding, that’s pretty impressive! In addition, some of our participants selected material to loan with them, these will also in part become NorBOL-barcodes.

Samples, samples everywhere

Samples, samples everywhere

 

 

 

 

 

IMGP0468We’ll process these as quickly as we can, taking pictures, filling in the forms and taking tissue samples for analysis at the CCDB lab in Canada – fingers crossed for a high success rate on the sequencing!

Preparing drawings using a camera lucida on the stereo microscope

Preparing drawings using a camera lucida on the stereo microscope

 

As mentioned previously we focused on the MAREANO-material, but supplemented with other samples – including those that we have collected ourselves. That meant that beauties like this one (picture below) could be examined in detail by an expert, and get properly identified before we send it off to become part of the BOLD-database.

Previously Euchone sp, now we have it identified as Euchone analis

Previously Euchone sp, now we have it identified as Euchone analis

Thank you to all our participants for a very productive and fun week!

The Museum’s scientific cruise of 2014

R/V Håkon Mosby in Lysefjorden. photo: K.Kongshavn

R/V Håkon Mosby in Lysefjorden. photos: K.Kongshavn

We’ve spent the past couple of  days out on the big ole’ blue, sampling along the south-western coast of Norway for bristle worms, worm molluscs, bubble snails and fish on board the research vessel “Håkon Mosby”.

We went from Bergen down to Lysefjorden in Rogaland, and had a highly productive trip. In total we sampled 30 stations using various kinds of gear (epibenthic sled, grab, net, trawl and triangular dredge) to capture our target animals.

This is a region that we have very little material from, and what we do have has been sampled in a way that makes it unsuitable for genetic work – so we went out to remedy that. Now the work begins with sorting and identifying the animals – but we already know that we have found some of the species that we were hunting for – so the cruise was definitely a success, and the scenery and weather made for a wonderful bonus!

Grab

Grab

Netting for fish in the littoral zone

Netting for fish in the littoral zone

Collecting in the littoral zone

Collecting in the littoral zone

Lab work onboard

Lab work onboard

No cruise without mud! This pile yielded three of the tiny snails one of our researchers was after; success!

No cruise without mud! This pile yielded three of the tiny snails one of our researchers was after; success!

IMG_0101

Sorting in the lab

Sorting in the lab

Trawl catch

Trawl catch

RP-sledge in the sunset

RP-sledge in the sunset

Emptying the triangular dredge

Emptying the triangular dredge

Friday Photo: A beautiful feather duster worm!

For todays photo we have a real beauty; this bristle worm (Polychaeta) from the family Sabellidae, the feather duster worms!

After being emailed this photo, one of our collaborators – who works with the Sabellidae – has identified it to the genus Euchone (Thanks, M.! ).

For an identification to species level, an examination of small details, such as the characteristics of individual bristles would be needed. Or we can barcode it and hope that a specimen from the same species has already been (correctly!) identified to species and uploaded to the database, in which case we would get a hit on “our” barcode. In this case, we hope to do both – get a name on it based on the morphology, and do genetic sequencing so that its genetic barcode can be included in the BOLD database  Euchone spEuchone sp. Photo: K. Kongshavn

It was collected just outside of Bergen on one of our day trips, and will be included in our ongoing effort to assemble a library of genetic barcodes for all the Norwegian marine invertebrates.

Collecting around the island Sotra

We went out collecting with R/V “Hans Brattstrøm” again last Thursday, below is a small sample of the various animals that we collected. These will be used for genetic barcoding through the NorBOL project.